學術報告通知
應大豆分子設計育種重點實驗室邀請，美國密西根州立大學分子遺傳學系副教授蔣寧擬于3月29日上午來所做學術報告。
報告人：蔣寧
報告題目：Transposable elements and the genome size viriation
報告時間：2016年3月29日(星期二)
上午9：30-11：30
報告地點：綜合樓4樓會議室（哈區視頻）
歡迎廣大師生踴躍參加！
2016年3月25日
報告人簡介
蔣寧，美國密西根州立大學分子遺傳學系副教授，在Nature，Science等國際頂級雜志上發表論文多篇，在轉座子在真核基因組多樣性中的作用及進化研究中取得了多項突破性的進展。
代表性論文：
Zhao D, Ferguson A, Jiang N.Transposition of a rice Mutator-like element in the yeast Saccharomyces cerevisiae. Plant Cell. 2015 ;27(1):132-48.
Gao D, Jiang N, Wing RA, Jiang J, Jackson SA. Transposons play an important role in the evolution and diversification of centromeres among closely related species. Front Plant Sci. 2015;6:216. doi: 10.3389/fpls
Law M, Childs KL, Campbell MS, Stein JC, Olson AJ, Holt C, Panchy N, Lei J, Jiao D, Andorf CM, Lawrence CJ, Ware D, Shiu SH, Sun Y, Jiang N, Yandell M. Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes. Plant Physiol. 2015;167(1):25-39.
Zhao D, Jiang N. Nested insertions and accumulation of indels are negatively correlated with abundance of mutator-like transposable elements in maize and rice. 2014;9(1):e87069.
Campbell MS, Law M, Holt C, Stein JC, Moghe GD, Hufnagel DE, Lei J, Achawanantakun R, Jiao D, Lawrence CJ, Ware D, Shiu SH, Childs KL, Sun Y, Jiang N, Yandell M. MAKER-P: a tool kit for the rapid creation, management, and quality control of plant genome annotations. Plant Physiol. 2014;164(2):513-24.
Ferguson AA, Zhao D, Jiang N. Selective acquisition and retention of genomic sequences by Pack-Mutator-like elements based on guanine-cytosine content and the breadth of expression. Plant Physiol. 2013;163(3):1419-32.
Jiang N. Computational methods for identification of DNA transposons. Methods Mol Biol. 2013;1057:289-304.
Jiang N. Overview of repeat annotation and de novo repeat identification. Methods Mol Biol. 2013;1057:275-87.
Jiang, N., Ferguson, A. A., Slotkin, R. K., Lisch, D. 2011. Pack-Mutator-like transposable elements (Pack-MULEs) induce directional modification of genes through biased insertion and DNA acquisition. Proc Natl Acad Sci USA 108:1537-1542.
Jiang, N., Gao, D., Xiao, H. and van der Knaap, E. 2009. Genome organization of the tomato sun locus and characterization of the unusual retrotransposon Rider. Plant J. 60:181-193.
Hanada, K., Vallejo, V., Nobuta, K., Slotkin, R.K., Lisch, D., Meyers, B.C., Shiu, S.H. and Jiang, N. 2009. The Functional Role of Pack-MULEs in Rice Inferred from Purifying Selection and Expression Profile. Plant Cell 21:25-38.
Xiao H., Jiang N., Schaffner E., Stockinger E.J., van der Knaap E. 2008. A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. Science 319:1527-1530
Jiang, N., Bao, Z., Zhang, X., Eddy, S.R. and Wessler, S.R. 2004. Pack-MULE transposable elements mediate gene evolution in plants. Nature 431:569-573.
Jiang, N., Feschotte, C., Zhang, X., and Wessler, S.R. 2004. Using rice to understand the origin and amplification of MITEs. Curr. Opin. Plant Biol. 7:115-119.
Jiang, N., Bao, Z., Zhang, X., Hirochika, H., Eddy, S.R., McCouch, S.R. and Wessler, S.R. 2003. An active DNA transposon family in rice. Nature 421:163-167.
Jiang, N., Jordan, I.K. and Wessler, S.R. 2002. Dasheng and RIRE2: a non-autonomous LTR element and its putative autonomous partner in the rice genome. Plant Physiol. 130:1697-1705.
Jiang, N., Bao, Z., Temnykh, S., Cheng, Z., Jiang, J., Wing, R.A., McCouch, S.R. and Wessler, S.R. 2002. Dasheng: a recently amplified non-autonomous LTR element that is a major component of pericentromeric regions in rice. Genetics 161:1293-1305.
Feschotte, C., Jiang, N. and Wessler, S.R. 2002. Plant transposable elements: where genetics meets genomics. Nature Rev. Genet. 3:329-341.
Jiang, N. and Wessler, S.R. 2001. Insertion preference of maize and rice MITEs as revealed by the analysis of nested elements. Plant Cell 13:2553-2564.
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